BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B04LP1|AL429683
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1483 1800 0.0
>3x_Contig1483
Length = 9730
Score = 1800 bits (906), Expect = 0.0
Identities = 912/916 (99%)
Strand = Plus / Plus
Query: 1 gatctcagtatgtataggctttatatagaatgctctttattttacttccctcagcctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5208 gatctcagtatgtataggctttatatagaatgctctttattttacttccctcagcctccc 5267
Query: 61 ttcctgttgaagatttaatatctaatttaccctgtttgtaacaagcctcagaccctaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5268 ttcctgttgaagatttaatatctaatttaccctgtttgtaacaagcctcagaccctaaaa 5327
Query: 121 tgtgatataaatattcgtgaaagcgccatataggtagtgtagtgcgctgctgtgtactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5328 tgtgatataaatattcgtgaaagcgccatataggtagtgtagtgcgctgctgtgtactac 5387
Query: 181 tatccgatggtcgtatcctctgttgatcactctgttttagctggaaaaatatagcgttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 tatccgatggtcgtatcctctgttgatcactctgttttagctggaaaaatatagcgttac 5447
Query: 241 ccgccctttaacattttaccttattagaacgattttgccactatcgaatataagagagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 ccgccctttaacattttaccttattagaacgattttgccactatcgaatataagagagac 5507
Query: 301 atgcaattcataattaatacataaggagttcacttcacgacaggktacaatcaacactaa 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5508 atgcaattcataattaatacataaggagttcacttcacgacaggttacaatcaacactaa 5567
Query: 361 agagtcaccaagggtattttctgcgaatccaatccattgaaacactttccaacatgaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 agagtcaccaagggtattttctgcgaatccaatccattgaaacactttccaacatgaatc 5627
Query: 421 acgatccatttgcctgggggaggccatctgacgaacactatggcgcgtacaatcatgcca 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628 acgatccatttgcctggggaaggccatctgacgaacactatggcgcgtacaatcatgcca 5687
Query: 481 ttgcccaagcgtcaaataatccaaagatgaatactcagaaccctattattaccggtactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5688 ttgcccaagcgtcaaataatccaaagatgaatactcagaaccctattattaccggtactt 5747
Query: 541 ctgtcatcagtattaagtataataacggtgttattgttgcagctgataatctaggtgctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5748 ctgtcatcagtattaagtataataacggtgttattgttgcagctgataatctaggtgctt 5807
Query: 601 acggttcgttattacgtttcacaaacgaggagagattgatcaaagtgggtcccaacacgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5808 acggttcgttattacgtttcacaaacgaggagagattgatcaaagtgggtcccaacacgg 5867
Query: 661 ttgttggtgtatccggtgacatttccgatatgcaatacattcaacatctattagacgaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5868 ttgttggtgtatccggtgacatttccgatatgcaatacattcaacatctattagacgaga 5927
Query: 721 tggaaattgaaaacaattacgatagcgcatatgcggataatgaggagcaattgaaaccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 tggaaattgaaaacaattacgatagcgcatatgcggataatgaggagcaattgaaaccaa 5987
Query: 781 gcttcgtttttkaatatctatcatctgtgatgtaccaacgtagatccaagttagatcctt 840
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 gcttcgtttttgaatatctatcatctgtgatgtaccaacgtagatccaagttagatcctt 6047
Query: 841 tatggaatgcgataattgtagggggsacagaagatggaaagccatttttaagatacgtta 900
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6048 tatggaatgcgataattgtagggggcacagaagatggaaagccatttttaagatacgtta 6107
Query: 901 acctattaggtgtcac 916
||||||||||||||||
Sbjct: 6108 acctattaggtgtcac 6123
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5549
Number of Sequences: 1807
Number of extensions: 5549
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)